Show simple item record

dc.contributor.authorBen M'barek, Marwa
dc.contributor.authorBorgi, Amel
dc.contributor.authorBen Hamida, Sana
HAL ID: 177299
ORCID: 0000-0003-4202-613X
dc.contributor.authorRukoz, Marta
dc.date.accessioned2019-10-07T14:29:00Z
dc.date.available2019-10-07T14:29:00Z
dc.date.issued2019
dc.identifier.urihttps://basepub.dauphine.fr/handle/123456789/20037
dc.language.isoenen
dc.subjectCommunity Detection
dc.subjectGenetic Algorithm
dc.subjectSemantic Similarity
dc.subjectProtein-Protein or Gene-Gene Interaction Networks
dc.subjectGene Ontology.
dc.subject.ddc005en
dc.titleGenetic Algorithm to Detect Different Sizes’ Communities from Protein-Protein Interaction Networks
dc.typeCommunication / Conférence
dc.contributor.editoruniversityotherLIPAH - Université de Tunis El Manar
dc.description.abstractenThe community detection in large networks is an important problem in many scientific fields ranging from Biology to Sociology and Computer Science. In this paper, we are interested in the detection of communities in the Protein-protein or Gene-gene Interaction (PPI) networks. These networks represent protein-protein or gene-gene interactions which corresponds to a set of proteins or genes that collaborate at the same cellularfunction. The goal is to identify such communities from gene annotation sources such as Gene Ontology. Wepropose a Genetic Algorithm based approach to detect communities having different sizes from PPI networks.For this purpose, we use a fitness function based on a similarity measure and the interaction value between proteins or genes. Moreover, a specific solution for representing a community and a specific mutation operator are introduced. In the computational tests carried out in this work, the introduced algorithm achieved excellent results to detect existing or even new communities from Protein-protein or Gene-gene Interaction networks.
dc.identifier.citationpages359-370
dc.relation.ispartofeditorM. van Sinderen, L. Maciaszek
dc.relation.ispartofpublnameSciTe Press
dc.contributor.countryeditoruniversityotherTUNISIA
dc.subject.ddclabelProgrammation, logiciels, organisation des donnéesen
dc.relation.ispartofisbn978-989-758-379-7
dc.relation.conftitleProceedings of the 14th International Conference on Software Technologie
dc.relation.confdate2019
dc.relation.forthcomingnonen
dc.identifier.doi10.5220/0007836703590370
dc.description.ssrncandidatenon
dc.description.halcandidateoui
dc.description.readershiprecherche
dc.description.audienceInternational
dc.date.updated2020-06-04T11:02:25Z
hal.faultCode{"duplicate-entry":{"hal-02286178":{"doi":"1.0"},"hal-02482236":{"doi":"1.0"}}}


Files in this item

Thumbnail

This item appears in the following Collection(s)

Show simple item record