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A new transmission route for the propagation of the SARS-CoV-2 coronavirus

Danchin, Antoine; Ng, Tuen Wai Patrick; Turinici, Gabriel (2021), A new transmission route for the propagation of the SARS-CoV-2 coronavirus, Biology, 10, 1, p. 10. 10.1101/2020.02.14.20022939

Type
Article accepté pour publication ou publié
External document link
https://hal.archives-ouvertes.fr/hal-02872801
Date
2021
Journal name
Biology
Volume
10
Number
1
Publisher
MDPI
Pages
10
Publication identifier
10.1101/2020.02.14.20022939
Metadata
Show full item record
Author(s)
Danchin, Antoine cc
Institut Cochin [IC UM3 (UMR 8104 / U1016)]
Ng, Tuen Wai Patrick
Institut Cochin [IC UM3 (UMR 8104 / U1016)]
Turinici, Gabriel cc
CEntre de REcherches en MAthématiques de la DEcision [CEREMADE]
Abstract (EN)
ackground: Starting late 2019, a novel coronavirus spread from the capital of the Hubei province in China to the rest of the country, then to most of the world. To anticipate future trends in the development of the pandemic, we explore here, based on public records of infected persons, how variation in the virus tropism could end up in different patterns, warranting a specific strategy to handle the epidemic. Methods: We use a compartmental model to describe the evolution of an individual through several possible states: susceptible, infected, alternative infection, detected, and removed. We fit the parameters of the model to the existing data, taking into account significant quarantine changes where necessary. Results: The model indicates that Wuhan quarantine measures were effective, but that alternative virus forms and a second propagation route are compatible with available data. For the Hong Kong, Singapore, and Shenzhen regions, the secondary route does not seem to be active. Conclusions: Hypotheses of an alternative infection tropism (the gut tropism) and a secondary propagation route are discussed using a model fitted by the available data. Corresponding prevention measures that take into account both routes should be implemented to the benefit of epidemic control.
Subjects / Keywords
COVID-19; SARS-CoV-2; epidemic model; contamination; SARS; coronavirus; coronavirus propagation

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